PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_317126g0010
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family bHLH
Protein Properties Length: 498aa    MW: 54814.2 Da    PI: 7.1033
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_317126g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.46.1e-09298342554
                     HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH   5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                     h + ErrRR++++++fe Lr l+P+ +      + +K +iL    eY+ sL
  MA_317126g0010 298 HMISERRRREKMKESFEALRLLIPPgS------RKDKTSILSYMREYLTSL 342
                     7889********************955......666777777777777666 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.491293342IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.10E-8295343No hitNo description
SuperFamilySSF474597.07E-14296365IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.7E-13298363IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.2E-6298342IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.3E-7299348IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010200Biological Processresponse to chitin
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 498 aa     Download sequence    Send to blast
MVRCRVPGLA LNQPPYVWLT ANELLRFSSD ESQGEFYRVA GIQVSVYTAL AVSDNWQDPL  60
NSLWFTAVFI PCGNGVVELG TTNLVQADEQ NKLRVRSLLT SVIMSTNISV PMPGTSISTS  120
SCSSLLARSI DSPGTSSMVS YVQYPTKTPD DQINIPQDNP QYSTSASDLA SGFYPYLQSF  180
QLPSSSGLLI TDHDHETTLV YPGSSQQISV PALLITPQTS QASDFPVVPP ERSMMPSAFG  240
MWRLPSKVLT PPMVEGQYRI KRCLAILRNI HAERVRQTSI SGSYRSPGGT ISSGQVLHMI  300
SERRRREKMK ESFEALRLLI PPGSRKDKTS ILSYMREYLT SLKSRAEELE ETNKQLESEL  360
KRFTRAQSQE GAGTSAALQQ QGSTRTEGDD SVVTVEVSKM GGSSTGTTCD EMGLVVVVEK  420
PTNTIDLMIA LLKSLREMGV PLISMDTSTA HHENDPSRLQ FRMSATIKLQ DEDVERLKEA  480
LRSALSKGRG RPPPPPQI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1301306ERRRRE
2302307RRRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56960.11e-10bHLH family protein